CrystFEL

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Examples of research using CrystFEL

This page contains references to research for which CrystFEL was used. If you've published a paper about research for which CrystFEL was important, please consider getting in touch so we can include your article in this list.

2022 (13 this year so far, 225 total to date)

P. Båth, A. Banacore, P. Börjesson, R. Bosman et al. "Lipidic cubic phase serial femtosecond crystallography structure of a photosynthetic reaction centre". Acta Cryst. D78 (2022) p698. doi:10.1107/S2059798322004144 (open access - download PDF). PDB IDs 7Q7P and 7Q7Q.
K. H. Nam, S. Park and J. Park. "Preliminary XFEL data from spontaneously grown endo-1,4-β-xylanase crystals from Hypocrea virens". Acta Cryst. F78 (2022). doi:10.1107/S2053230X22005118.
H. J. Kirkwood, R. de Wijn, G. Mills, R. Letrun et al. "A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL". Scientific Data 9 (2022) 161. doi:10.1038/s41597-022-01266-w (open access - download PDF). CXIDB ID 185.
M. Maestre-Reyna, C.-H. Yang, E. Nango, W.-C. Huang et al. "Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme". Nature Chemistry (2022). doi:10.1038/s41557-022-00922-3. PDB IDs 7F8T, 7VJ8, 7VIW, 7VIX, 7VIY, 7VIZ, 7VJ0, 7VJ1, 7VJ2, 7VJ3, 7VJ4, 7VJ5, 7VJ6, 7VJ9, 7VJA, 7VJB, 7VJC, 7VJE, 7VJG, 7VJH, 7VJI, 7VJJ, 7VJK and 7VJ7.
J. M. Martin-Garcia, S. Botha, H. Hu, R. Jernigan et al. "Serial macromolecular crystallography at ALBA Synchrotron Light Source". J. Synchrotron Radiation 29 (2022). doi:10.1107/S1600577522002508 (open access - download PDF).
M. W. Kepa, T. Tomizaki, Y. Sato, D. Ozerov et al. "Acoustic levitation and rotation of thin films and their application for room temperature protein crystallography". Scientific Reports 12 (2022) 5349. doi:10.1038/s41598-022-09167-z (open access - download PDF).
A. Cellini, M. K. Shankar, W. Y. Wahlgren, A. Nimmrich et al. "Structural basis of the radical pair state in photolyases and cryptochromes". Chemical Communincations (2022). doi:10.1039/D2CC00376G (open access - download PDF).
T. Hosaka, T. Nomura, M. Kubo, T. Nakane et al. "Conformational alterations in unidirectional ion transport of a light-driven chloride pump revealed using X-ray free electron lasers". PNAS 119 e2117433119 (2022). doi:10.1073/pnas.2117433119 (open access - download PDF). PDB IDs 7VGT, 7VGU and 7VGV. CXIDB ID 192.
M. Vakili, J. Bielecki, J. Knoska, F. Otte et al. "3D printed devices and infrastructure for liquid sample delivery at the European XFEL". J. Synchrotron Radiation 29 (2022). doi:10.1107/S1600577521013370 (open access - download PDF).
S. Mous, G. Gotthard, D. Ehrenberg et al. "Dynamics and mechanism of a light-driven chloride pump". Science (2022). doi:10.1126/science.abj6663. PDB IDs 7O8F, 7O8G, 7O8H, 7O8I, 7O8J, 7O8K, 7O8L, 7O8M, 7O8N, 7O8O, 7O8P, 7O8Q, 7O8R, 7O8S, 7O8T, 7O8U, 7O8V, 7O8Y and 7O8Z.
K. H. Nam. "Processing of Multicrystal Diffraction Patterns in Macromolecular Crystallography Using Serial Crystallography Programs". Crystals 12 (2022) 103. doi:10.3390/cryst12010103 (open access - download PDF).
K. H. Nam. "Beef tallow matrix for serial crystallography". Scientific Reports 12 (2022) 694. doi:10.1038/s41598-021-04714-6 (open access - download PDF). PDB IDs 7E02 and 7E03. CXIDB IDs 165 and 166.
D. Pan, R. Oyama, T. Sato, T. Nakane et al. "Crystal structure of CmABCB1 multi-drug exporter in lipidic mesophase revealed by LCP-SFX". IUCrJ 9 (2022) p134. doi:10.1107/S2052252521011611 (open access - download PDF). PDB ID 7FC9. CXIDB ID 193.

2021 (27 this year, 212 total to date)

K. Nass, C. Bacellar, C. Cirelli, F. Dworkowski et al. "Pink-beam serial femtosecond crystallography for accurate structure-factor determination at an X-ray free-electron laser". IUCrJ 8 (2021). doi:10.1107/S2052252521008046 (open access - download PDF). PDB IDs 7O44, 7O5K, 7O51, 7O5J and 7O53. CXIDB ID 180.
T. Murakawa, M. Suzuki, T. Arima, M. Sugahara et al. "Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase". Acta Cryst. F77 (2021). doi:10.1107/S2053230X21008967. PDB ID 7F8K.
M. Hadian-Jazi, A. Sadri, A. Barty, O. Yefanov et al. "Data reduction for serial crystallography using a robust peak finder". J. Appl. Cryst. 54 (2021). doi:10.1107/S1600576721007317 (open access - download PDF).
S. Pandey, G. Calvey, A. M. Katz, T. Narsingh Malla et al. "Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallographydoi:10.1107/S2052252521008125 (open access - download PDF). PDB IDs 7K8L, 7K8E, 7K8F, 7K8H and 7K8K. CXIDB ID 170.
I. Martiel, J. H. Beale, A. Karpik, C.-Y. Huang et al. "Versatile microporous polymer-based supports for serial macromolecular crystallography". Acta Cryst. D77 (2021). doi:10.1107/S2059798321007324 (open access - download PDF). PDB ID 7AI8.
S. Durdagi, C. Dağ, B. Dogan, M. Yigin et al. "Near-physiological-temperature serial crystallography reveals conformations of SARS-CoV-2 main protease active site for improved drug repurposing". Structure (2021). doi:10.1016/j.str.2021.07.007 (open access - download PDF). PDB IDs 7CWB and 7CWC.
H. Liu, R. N. V. K. Deepak, A. Shiriaeva, C. Gati et al. "Molecular basis for lipid recognition by the prostaglandin D₂ receptor CRTH2. PNAS 32 (2021) e2102813118. doi:10.1073/pnas.2102813118.
A. Cellini, W. Y. Wahlgren, L. Henry, S. Pandey et al. "The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature". Acta Cryst. D 77 (2021) p1001. doi:10.1107/S2059798321005830 (open access - download PDF). PDB ID 7AZT.
Z. Su, J. Cantlon, L. Douthit, M. Wiedorn et al. "Serial crystallography using automated drop dispensing". J. Synchrotron Radiation 28 (2021). doi:10.1107/S1600577521006160 (open access - download PDF).
K. H. Nam and Y. Cho. "Stable sample delivery in a viscous medium via a polyimide-based single-channel microfluidic chip for serial crystallography". J. Appl. Cryst. 54 (2021). doi:10.1107/S1600576721005720. PDB ID 7DTF. CXIDB ID 164.
K. H. Nam, J. Kim and Y. Cho. "Polyimide mesh-based sample holder with irregular crystal mounting holes for fixed-target serial crystallography". Scientific Reports 11 (2021) 13115. doi:10.1038/s41598-021-92687-x (open access - download PDF). PDB ID 7DTB. CXIDB ID 163.
J. M. Lahey-Rudolph, R. Schönherr, M. Barthelmess, P. Fischer et al. "Fixed-target serial femtosecond crystallography using in cellulo grown microcrystals". IUCrJ 8 (2021). doi:10.1107/S2052252521005297 (open access - download PDF). PDB IDs 7ASI and 7ASX.
R. Bücker, P. Hogan-Lamarre and R. J. D. Miller. "Serial Electron Diffraction Data Processing With diffractem and CrystFEL". Frontiers in Molecular Biosciences 8:624264 (2021). doi:10.3389/fmolb.2021.624264 (open access - download PDF). PDB ID 6S2N.
Q. Zhou, Z.-Q. Gao, Z. Dong,. Y.-M. Jiang et al. "A reference-based multi-lattice indexing method integrating prior information correction and iterative refinement in protein crystallography". Acta Cryst. A77 (2021). doi:10.1107/S2053273321003521.
B. Norton-Baker, P. Mehrabi, J. Boger, R. Schönherr et al. "A simple vapor-diffusion method enabled protein crystallography inside the HARE serial crystallography chip". Acta Cryst. D77 (2021). doi:10.1107/S2059798321003855 (open access - download PDF). PDB IDs 7NJE, 7NJF, 7NJG, 7NJH, 7NJI, 7NJJ and 7NJK.
D. Sorigué, K. Hadjidemetriou, S. Blangy, G. Gotthard et al. "Mechanism and dynamics of fatty acid photodecarboxylase". Science 372 (2021) 148. doi:10.1126/science.abd5687. PDB ID 6ZH7. CXIDB ID 177.
K. H. Nam. "Room-temperature structure of xylitol-bound glucose isomerase by serial crystallography: Xylitol binding in the M1 site induces release of metal bound in the M2 site". Int. J. Mol. Sci. 22 (2021) 3892. doi:10.3390/ijms22083892 (open access - download PDF).
K. Oda, T. Nomura, T. Nakane, K. Yamashita et al. "Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin". eLife 10:e62389 (2021). doi:10.7554/eLife.62389 (open access - download PDF). PDB IDs 7C86, 7E6Y, 7E6Z, 7E70, 7E70, 7E71 and 7E6X. CXIDB ID 150.
J.-H. Yun, X. Li, J. Yue, J.-H. Park et al. "Early-stage dynamics of chloride ion-pumping rhodopsin revealed by a femtosecond X-ray laser". PNAS 118 (2021) e2020486118. doi:10.1073/pnas.2020486118 (open access - download PDF). PDB IDs 7CRJ, 7CRI, 7CRK, 7CRL, 7CRS, 7CRT, 7CRX and 7CRY.
S. Ramakrishnan, J. R. Stagno, C. E. Conrad, J. Ding et al. "Synchronous RNA conformational changes trigger ordered phase transitions in crystals". Nature Communications 12 (2021) 1762. doi:10.1038/s41467-021-21838-5 (open access - download PDF). PDB IDs 6VWT and 6VWV.
I. Nam, C.-K. Min, B. Oh, G. Kim et al. "High-brightness self-seeded X-ray free-electron laser covering the 3.5 keV to 14.6 keV range". Nature Photonics (2021). doi:10.1038/s41566-021-00777-z. PDB IDs 7BYO, 7D01, 7D04, 7BYP, 7D02 and 7D05. CXIDB ID 172.
K. Hasegawa, S. Baba, T. Kawamura, M. Yamamoto and T. Kumasaka. "Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with humid air and glue-coating method". Acta Cryst. D77 (2021) p300. doi:10.1107/S2059798321001686 (open access - download PDF). PDB IDs 7CDN, 7CDK, 7CDM, 7CDO, 7CDP, 7CDQ, 7CDR, 7CDS, 7CDT and 7CDU.
D. K. Schneider, W. Shi, B. Andi, J. Jakoncic et al. "FMX - the Frontier Microfocusing Macromolecular Crystallography Beamline at the National Synchrotron Light Source II". J. Sync. Rad. 28 (2021) p650. doi:10.1107/S1600577520016173.
C. Stohrer, S. Horrell, S. Meier, M. Sans et al. "Homogeneous batch micro-crystallization of proteins from ammonium sulfate". Acta Cryst. D77 (2021). doi:10.1107/S2059798320015454 (open access - download PDF).
M. Hadian-Jazi, P. Berntsen, H. Marman, B. Abbey and C. Darmanin. "Analysis of multi-hit crystals in serial synchrotron crystallography experiments using high-viscosity injectors". Crystals 11 (2021) 49. doi:10.3390/cryst11010049 (open access - download PDF).
M. L. Grünbein, L. Foucar, A. Gorel, M. Hilpert et al. "Observation of shock-induced protein crystal damage during metahertz serial femtosecond crystallography". Physical Review Research 3 (2021) 013046. doi:10.1103/PhysRevResearch.3.013046 (open access - download PDF).
S. L. Rose, S. V. Antonyuk, D. Sasaki, K. Yamashita et al. "An unprecedented insight into the catalytic mechanism of copper nitrite reductase from atomic-resolution and damage-free structures". Science Advances 7 (2021) eabd8523. doi:10.1126/sciadv.abd8523 (open access - download PDF). PDB IDs 6ZAS, 6ZAU and 6ZAW.

2020 (39 this year, 185 total to date)

D.-H. Gu, C. Eo, D. T. Jeong, J.-S. Kim, S.-Y. Park "Synchrotron serial crystallography at 11C beamline of Pohang Light Source-II". Biodesign 8 (2020) p93. doi:10.34184/kssb.2020.8.4.93 (open access - download PDF).
D. Im, A. Inoue, T. Fujiwara, T. Nakane et al. "Structure of the dopamine D₂ receptor in complex with the antipsychotic drug spiperone". Nature Communications 11 (2020) 6442. doi:10.1038/s41467-020-20221-0 (open access - download PDF). PDB ID 7DFP. CXIDB ID 110.
A. Gorel, M. L. Grünbein, R. Bean, J. Bielecki et al. "Shock damage analysis in serial femtosecond crystallography data collected at MHz X-ray free-electron lasers". Crystals 10 (2020) 1145. doi:10.3390/cryst10121145 (open access - download PDF). CXIDB ID 144.
R. Dods, P. Båth, D. Morozov, V. Ahlberg Gagnér et al. "Ultrafast structural changes within a photosynthetic reaction centre". Nature (2020). doi:10.1038/s41586-020-3000-7. PDB IDs 5O4C, 5NJ4, 6ZHW, 6ZI4, 6ZID, 6ZI6, 6ZI5, 6ZI9 and 6ZIA. CXIDB ID 161.
S. Görlich, A. J. Samuel, R. J. Best, R. Seidel et al. "Natural hybrid silica/protein superstructure at atomic resolution". PNAS (2020). doi:10.1073/pnas.2019140117 (open access - download PDF). PDB ID 6ZQ3.
E. Marin, A. Luginina, A. Gusach, K. Kovalev et al. "Small-wedge synchrotron and serial XFEL datasets for Cysteinyl leukotriene GPCRs". Scientific Data 7 (2020) 388. doi:10.1038/s41597-020-00729-2 (open access - download PDF). CXIDB IDs 106 and 107.
K. Ihara, M. Hato, T. Nakane, K. Yamashita et al. "Isoprenoid-chained lipid EROCOC₁₇₊₄: a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography". Scientific Reports 10 (2020) 19305. doi:10.1038/s41598-020-76277-x (open access - download PDF). PDB IDs 6LPJ and 6LPK. CXIDB ID 140.
I. Martiel, C.-Y. Huang, P. Villanueva-Perez, E. Panepucci et al. "Low-dose in situ prelocation of protein microcrystals by 2D X-ray phase-contrast imaging for serial crystallography". IUCrJ 7 (2020). doi:10.1107/S2052252520013238 (open access - download PDF). PDB IDs 6YOC, 6YOE and 6YOG.
F.-Z. Zhao, B. Sun, L. Yu, Q.-J. Xiao et al. "A novel sample delivery system based on circular motion for in situ serial synchrotron crystallography". Lab on a Chip 20 (2020) 3888. doi:10.1039/D0LC00443J. PDB IDs 7C09 and 7C0P.
M.-Y. Lee, J. Geiger, A. Ishchenko. G. W. Han et al. "Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase". IUCrJ 7 (2020). doi:10.1107/S2052252520012701 (open access - download PDF).
S.-Y. Park, H. Choi, C. Eo, Y. Cho and K. H. Nam. "Fixed-target serial synchrotron crystallography using nylon mesh and enclosed film-based sample holder". Crystals 10 (2020) 803. doi:10.3390/cryst10090803 (open access - download PDF). PDB IDs 7CVJ, 7CVK, 7CVL and 7CVM. CXIDB IDs 157, 158, 159 and 160.
M. Lučić, D. A. Svistunenko, M. T. Wilson, A. K. Chaplin et al. "Serial femtosecond zero dose crystallography captures a water-free distal heme site in a dye-decolorising peroxidase to reveal a catalytic role for an arginine in Fe^IV=O formation". Angewandte Chemie 59 (2020) p21656. doi:10.1002/anie.202008622 (open access - download PDF).
A. Echelmeier, J. Cruz Villarreal, M. Messerschmidt, D. Kim et al. "Segmented flow generator for serial crystallography at the European X-ray free electron laser". Nature Communications 11 (2020) 4511. doi:10.1038/s41467-020-18156-7 (open access - download PDF). PDB ID 6U57. CXIDB ID 152.
K. Nass, R. Cheng, L. Vera, A. Mozzanica et al. "Advances in long-wavelength native phasing at X-ray free-electron lasers". IUCrJ 7 (2020). doi:10.1107/S2052252520011379 (open access - download PDF). PDB IDs 6S0L, 6S0Q, 6S19, 6S1D, 6S1E and 6S1G. CXIDB IDs 103, 104 and 105.
A. Shilova, H. Lebrette, O. Aurelius, J. Nan et al. "Current status and future opportunities for serial crystallography at MAX IV Laboratory". J. Synchrotron Radiation 27 (2020). doi:10.1107/S1600577520008735 (open access - download PDF). PDB IDs 6Y4C, 6Y78 and 6Y2N.
K. H. Nam. "Lard injection matrix for serial crystallography". Int. J. Mol. Sci. 21 (2020) 5977. doi:10.3390/ijms21175977 (open access - download PDF). PDB IDs 7CJZ and 7CK0. CXIDB IDs 153 and 154.
T. Clairfeuille, K. R. Buchholz, Q. Li, E. Verschueren et al. "Structure of the essential inner membbrance lipopolysaccharide-PbgA complex". Nature 584 (2020) p479. doi:10.1038/s41586-020-2597-x. PDB ID 6XLP.
K. Lee, D. Lee, S. Baek, J. Park et al. "Viscous-medium-based crystal support in a sample holder for fixed-target serial femtosecond crystallography". J. Appl. Cryst. 53 (2020) 1051. doi:10.1107/S1600576720008663. PDB IDs 6LL2 and 6LL3.
Y. Shi and H. Liu. "EM-detwin: A program for resolving indexing ambiguity in serial crystallography using the expectation-maximization algorithm". Crystals 10 (2020) 588. doi:10.3390/cryst10070588 (open access - download PDF).
N. Nagaratnam, Y. Tang, S. Botha, J. Saul et al. "Enhanced X-ray diffraction of in vivo-grown µNS crystals by viscous jets at XFELs". Acta Cryst. F76 (2020). doi:10.1107/S2053230X20006172 (open access - download PDF).
P. Skopintsev, D. Ehrenberg, T. Weinert, D. James et al. "Femtosecond-to-millisecond structural changes in a light-driven sodium pump". Nature (2020). doi:10.1038/s41586-020-2307-8. PDB IDs 6TK7, 6TK6, 6TK5, 6TK4, 6TK3, 6TK2 and 6TK1.
K. H. Nam. "Polysaccharide-based injection matrix for serial crystallography". Int. J. Mol. Sci. 21 (2020) 3332. doi:10.3390/ijms21093332 (open access - download PDF). PDB IDs 7BVL, 7BVM, 7BVN and 7BVO. CXIDB IDs 124, 125, 126 and 127.
K. Nass, A. Gorel, M. M. Abdullah, A. V. Martin et al. "Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses". Nature Communications 11 (2020) 1814. doi:10.1038/s41467-020-15610-4 (open access - download PDF). PDB IDs 6SRJ, 6SRQ, 6SRK, 6SRL, 6SRO, 6SRP, 6SR0, 6SR1, 6SR2, 6SR3, 6SR4 and 6SR5.
X. Li, C. Li and H. Liu. "SPIND-TC: an indexing method for two-color X-ray diffraction data". Acta Cryst. A76 (2020). doi:10.1107/S2053273320001916 (open access - download PDF).
D. Lee, S. Park, K. Lee, J. Kim et al. "Application of a high-throughput microcrystal delivery system to serial femtosecond crystallography". Journal of Applied Crystallography 53 (2020) p477. doi:10.1107/S1600576720002423 (open access - download PDF). PDB ID 6J43.
J. Zook, M. Shekhar, D. Hansen, C. Conrad et al. "XFEL and NMR Structures of Francisella Lipoprotein Reveal Conformational Space of Drug Target against Tularemia". Structure (2020). doi:10.1016/j.str.2020.02.005. PDB ID 6PNY.
A. M. Wolff, I. D. Young, R. G. Sierra, A. S. Brewster et al. "Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals". IUCrJ 7 (2020) p306. doi:10.1107/S205225252000072X (open access - download PDF). PDB ID 6U5E.
R. Bücker, P. Hogan-Lamarre, P. Mehrabi, E. C. Schulz et al. "Serial protein crystallography in an electron microscope". Nature Communications 11 (2020) 996. doi:10.1038/s41467-020-14793-0 (open access - download PDF). PDB IDs 6S2O and 6S2N.
E. de la Mora, N. Coquelle, C. S. Bury, M. Rosenthal et al. "Radiation damage and dose limits in serial synchrotron crystallography at cryo- and room temperatures". PNAS (2020). doi:10.1073/pnas.1821522117 (open access - download PDF). PDB IDs 6Q88 and 6Q8T.
J. Woodhouse, G. Nass Kovacs, N. Coquelle, L. M. Uriarte et al. "Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy". Nature Communications 11 (2020) 741. doi:10.1038/s41467-020-14537-0 (open access - download PDF). PDB IDs 6T39 and 6T3A.
K. Kovalev, R. Astashkin, I. Gushchin, P. Orekhov et al. "Molecular mechanism of light-driven sodium pumping". Nature Communications 11 (2020) 2137. doi:10.1038/s41467-020-16032-y (open access - download PDF). PDB ID 6YC0. CXIDB ID 141.
J. Knoška, L. Adriano, S. Awel, K. R. Beyerlein et al. "Ultracompact 3D microfluidics for time-resolved structural biology". Nature Communications 11 (2020) 657. doi:10.1038/s41467-020-14434-6 (open access - download PDF). PDB ID 6R2O. CXIDB ID 120.
M. Sugahara, K. Motomura, M. Suzuki, T. Masuda et al. "Viscosity-adjustable grease matrices for serial nanocrystallography". Scientific Reports 10 (2020) 1371. doi:10.1038/s41598-020-57675-7 (open access - download PDF). CXIDB ID 101.
K. Nass, L. Redecke, M. Perbandt, O. Yefanov et al. "In cellulo crystallisation of Trypanosoma brucei IMP dehydrogenase enables the identification of genuine co-factors". Nature Communications 11 (2020) 620. doi:10.1038/s41467-020-14484 (open access - download PDF). PDB ID 6RFU.
D. C. F. Monteiro, D. von Stetten, C. Stohrer, M. Sans et al. "3D-MiXD: 3D-printed X-ray-compatible microfluidic devices for rapid, low-consumption serial synchrotron crystallography data collection in flow". IUCrJ 7 (2020). doi:10.1107/S2052252519016865 (open access - download PDF). PDB IDs 6RXH and 6RXI.
Y. Gevorkov, A. Barty, W. Brehm, T. A. White et al. "pinkIndexer - a universal indexer for pink-beam X-ray and electron diffraction snapshots". Acta Cryst. A76 (2020). doi:10.1107/S2053273319015559 (open access - download PDF).
K. H. Nam. "Shortening injection matrix for serial crystallography". Scientific Reports 10 (2020) 107. doi:10.1038/s41598-019-56135-1 (open access - download PDF). PDB IDs 6KCA, 6KCB, 6KCC and 6KCD. CXIDB IDs 112, 113, 114 and 115.
K. N. Nam. "Stable sample delivery in viscous media via a capillary for serial crystallography". J. Appl. Cryst. 53 (2020). doi:10.1107/S1600576719014985. PDB IDs 6KD1 and 6KD2.
M. L. Shelby, D. Gilbile, T. D. Grant, C. Seuring et al. "A fixed-target platform for serial femtosecond crystallography in a hydrated environment". IUCrJ 7 (2020). doi:10.1107/S2052252519014003 (open access - download PDF).

2019 (35 this year, 146 total to date)

O. Yefanov, D. Oberthür, R. Bean, M. O. Wiedorn et al. "Evaluation of serial crystallographic structure determination within megahertz pulse trains". Structural Dynamics 6 (2019) 064702. doi:10.1063/1.5124387 (open access - download PDF). CXIDB ID 98.
S. Pandey, R. Bean, T. Sato, I. Poudyal et al. "Time-resolved serial femtosecond crystallography at the European XFEL". Nature Methods (2019). doi:10.1038/s41592-019-0628-z. PDB IDs 6P4I, 6P5D, 6P5E, 6P5G and 6P5F. CXIDB ID 100.
S. H. Park, J. Park, S. J. Lee, W. S. Yang et al. "A host dTMP-bound structure of T4 phage dCMP hydroxymethylast mutant using an X-ray free electron laser". Scientific Reports 9 (2019) 16316. doi:10.1038/s41598-019-52825-y (open access - download PDF). PDB ID 6L18.
C. Gisriel, J. Coe, R. Letrun, O. M. Yefanov et al. "Membrane protein megahertz crystallography at the European XFEL". Nature Communications 10 (2019) 5021. doi:10.1038/s41467-019-12955-3 (open access - download PDF). PDB ID 6PGK. CXIDB ID 111.
N. Stander, P. Fromme and N. Zatsepin. "DatView: a graphical user interface for visualizing and querying large data sets in serial femtosecond crystallography". J. Appl. Cryst. 52 (2019). doi:10.1107/S1600576719012044 (open access - download PDF).
A. Ishchenko, B. Stauch, G. W. Han, A. Batyuk et al. "Toward G protein-coupled receptor structure-based drug design using X-ray lasers". IUCrJ 6 (2019). doi:10.1107/S2052252519013137 (open access - download PDF). PDB IDs 6PRZ, 6PS2, 6PS0, 6PS1, 6PS6, 6PS3, 6PS4, 6PS5, 6PS7 and 6PS8.
M. Suga, F. Akita, K. Yamashita, Y. Nakajima et al. "An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser". Science 366 (2019) 334. doi:10.1126/science.aax6998. PDB IDs 6JLJ, 6JLK, 6JLL, 6JLM, 6JLN, 6JLO and 6JLP.
Y. Shimazu, K. Tono, T. Tanaka, Y. Yamanaka et al. "High-viscosity sample-injection device for serial femtosecond crystallography at atmospheric pressure". J. Appl. Cryst. 52 (2019). doi:10.1107/S1600576719012846 (open access - download PDF). PDB IDs 6JZH and 6JZI.
T. Moreno-Chicano, A. Ebrahim, D. Axford, M. V. Appleby et al. "High-throughput structures of protein-ligand complexes at room temperature using serial femtosecond crystallography". IUCrJ 6 (2019). doi:10.1107/S2052252519011655 (open access - download PDF). PDB IDs 6I7F, 6I6G, 6I7C and 6QWG.
K. Koiwai, J. Tsukimoto, T. Higashi, F. Mafune et al. "Improvement of production and isolation of human neuraminidase-1 in cellulo crystals". ACS Applied Bio Materials (2019). doi:10.1021/acsabm.9b00686.
A. Luginina, A. Gusach, E. Marin, A. Mishin et al. "Structure-based mechanism of cysteinyl leukotriene receptor inhibition by antiasthmatic drugs". Science Advances 5 (2019) eaax2518. doi:10.1126/sciadv.aax2518 (open access - download PDF). PDB ID 6RZ5.
R. Andersson, C. Safari, P. Båth, R. Bosman et al. "Well-based crystallization of lipidic cubic phase microcrystals for serial X-ray crystallography experiments". Acta Cryst. D75 (2019) p937. doi:10.1107/S2059798319012695.
J. C. Sanchez, M. Carrillo, S. Pandey, M. Noda et al. "High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures". Structural Dynamics 6 (2019) 054701. doi:10.1063/1.5120527 (open access - download PDF). PDB ID 6PTQ.
P. Mehrabi, E. C. Schulz, M. Agthe, S. Horrell et al. "Liquid application method for time-resolved analyses by serial synchrotron crystallography". Nature Methods (2019). doi:10.1038/s41592-019-0553-1 (open access - download PDF).
A. Echelmeier, D. Kim, J. Cruz Villarreal, J. Coe et al. "3D printed droplet generation devices for serial femtosecond crystallography enabled by surface coating". J. Appl. Cryst. 52 (2019) p997. doi:10.1107/S1600576719010343.
Y. Gevorkov, O. Yefanov, A. Barty, T. A. White et al. "XGANDALF - extended gradient descent algorithm for lattice finding". Acta Cryst. A75 (2019) p694. doi:10.1107/S2053273319010593 (open access - download PDF).
P. Berntsen, M. Hadian Jazi, M. Kusel, A. V. Martin et al. "The serial millisecond crystallography instrument at the Australian Synchrotron incorporating the 'Lipidico' injector". Rev. Scientific Instruments 90 (2019) 085110. doi:10.1063/1.5104298 (open access - download PDF). PDB ID 6MQV.
A. Tolstikova, M. Levantino, O. Yefanov, V. Hennicke et al. "1 kHz fixed-target serial crystallography using a multilayer monochromator and an integrating pixel detector". IUCrJ 6 (2019). doi:10.1107/S205225251900914X (open access - download PDF). PDB IDs 6QY2, 6QY1, 6QXW, 6QXV, 6QY4 and 6QY0.
S.-Y. Park and K. H. Nam. "Sample delivery using viscous media, a syringe and a syringe pump for serial crystallography". J. Synchrotron Radiation 26 (2019). doi:10.1107/S160057751900897X. PDB IDs 6JXP and 6JXQ. CXIDB IDs 95 and 96.
R. J. Trachman III, J. R. Stagno, C. Conrad, C. P. Jones et al. "Co-crystal structure of the iMango-III fluorescent RNA aptamer using an X-ray free-electron laser". Acta Cryst. F75 (2019). doi:10.1107/S2053230X19010136. PDB ID 6PQ7.
P. Lindenberg, L. Ruiz Arana, L. K. Mahnke, P. Rönfeldt et al. "New insights into the crystallization of polymorphic materials: from real-time serial crystallography to luminescence analysis". Reaction Chemistry and Engineering (2019). doi:10.1039/c9re00191c (open access - download PDF).
C. Jones, B. Tran, C. Conrad, J. Stagno et al. "Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser". Acta Cryst. F75 p496. doi:10.1107/S2053230X19008549. PDB ID 6OD9.
T. P. Halsted, K. Yamashita, C. C. Gopalasingam, R. T. Shenoy et al. "Catalytically important damage-free structures of a copper nitrite reductase obtained by femtosecond X-ray laser and room-temperature neutron crystallography". IUCrJ 6 (2019) p761. doi:10.1107/S205225251900828 (open access - download PDF). PDB IDs 6GSQ, 6GT0 and 6GT2.
J. Lieske, M. Cerv, S. Kreida, D. Komadina et al. "On-chip crystallization for serial crystallography experiments and on-chip ligand-binding studies". IUCrJ 6 (2019). doi:10.1107/S205225251900739 (open access - download PDF). PDB ID 6QF5.
S. Tsujino, A. Shinoda and T. Tomizaki. "On-demand droplet loading of ultrasonic acoustic levitator and its application for protein crystallography experiments". Appl. Physics Lett. 114 (2019) 213702. doi:10.1063/1.5095574.
D. Lee, S. Baek, J. Park, K. Lee et al. "Nylon mesh-based sample holder for fixed-target serial femtosecond crystallography". Scientific Reports 9 (2019) 6971. doi:10.1038/s41598-019-43485-z (open access - download PDF). PDB IDs 6IRJ and 6IRK. CXIDB IDs 89 and 90.
A. Ebrahim, T. Moreno-Chicano, M. V. Appleby, A. K. Chaplin et al. "Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins". IUCrJ 6 (2019). doi:10.1107/S2052252519003956 (open access - download PDF). PDB ID 6I43.
L. C. Johansson, B. Stauch, J. D. McCorvy, G. W. Han et al. "XFEL structures of the human MT₂ melatonin receptor reveal the basis of subtype selectivity. Nature (2019). doi:10.1038/s41586-019-1144-0. PDB IDs 6ME6, 6ME7, 6ME8 and 6ME9.
B. Stauch, L. C. Johansson, J. D. McCorvy, N. Patel et al. "Structural basis of ligand recognition at the human MT₁ melatonin receptor. Nature (2019). doi:10.1038/s41586-019-1141-3. PDB IDs 6ME2, 6ME3, 6ME4 and 6ME5.
J.-H. Park, J.-H. Yun, Y. Shi, J. Han et al. "Non-cryogenic structure and dynamics of HIV-1 integrase catalytic core domain by X-ray free-electron lasers". International Journal of Molecular Sciences 20 (2019) 1943. doi:10.3390/ijms20081943 (open access - download PDF). PDB IDs 6JCG and 6JCF. CXIDB ID 99.
J. M. Martin-Garcia, L. Zhu, D. Mendez, M.-Y. Lee et al. "High-viscosity injector-based pink-beam serial crystallography of microcrystals at a synchrotron radiation source". IUCrJ 6 (2019). doi:10.1107/S205225251900263X (open access - download PDF). PDB ID 6MH8.
H. I. Ciftci, R. G. Sierra, C. H. Yoon, Z. Su et al. "Serial femtosecond X-ray diffraction of HIV-1 Gag MA-IP6 microcrystals at ambient temperature". Int. J. Mol. Sci. 20 (2019) 1675. doi:10.3390/ijms20071675 (open access - download PDF).
J. Park, S. Park, J. Kim, G. Park et al. "Polyacrylamide injection matrix for serial femtosecond crystallography". Scientific Reports 9 (2019) 2525. doi:10.1038/s41598-019-39020-9 (open access - download PDF). PDB IDs 6IG6 and 6IG7. CXIDB IDs 84 and 85.
D. C. F. Monteiro, M. Vakili, J. Harich, M. Sztucki et al. "A microfluidic flow-focusing device for low sample consumption serial synchrotron crystallography experiments in liquid flow". J. Synchrotron Radiation 26 (2019). doi:10.1107/S1600577519000304. PDB ID 6H79.
C. Li, X. Li, R. Kirian, J. C. H. Spence et al. "SPIND: a reference-based auto-indexing algorithm for sparse serial crystallography data". IUCrJ 6 (2019). doi:10.1107/S2052252518014951 (open access - download PDF).

2018 (15 this year, 111 total to date)

M. Audet, K. L. White, B. Breton, B. Zarzycka et al. "Crystal structure of misoprostol bound to the labor inducer prostaglandin E₂ receptor. Nature Chemical Biology 15 (2018) p11. doi:10.1038/s41589-018-0160-y. PDB ID 6M9T.
J.-H. Yun, X. Li, J.-H. Park, Y. Wang et al. "Non-cryogenic structure of a chloride pump provides crucial clues to temperature-dependent channel transport efficiency". J. Biol. Chem. jbc.RA118.004038 (2018). doi:10.1074/jbc.RA118.004038 (open access - download PDF). PDB ID 5ZTL.
R. B. Doak, G. Nass Kovacs, A. Gorel, L. Foucar et al. "Crystallography on a chip - without the chip: sheet-on-sheet sandwich". Acta Cryst. D74 p1000. doi:10.1107/S2059798318011634 (open access - download PDF). PDB IDs 6GF0 and 6HAL
M. O. Wiedorn, D. Oberthür, R. Bean, R. Schubert et al. "Megahertz serial crystallography". Nature Communications 9 (2018) 4025. doi:10.1038/s41467-018-06156-7 (open access - download PDF). PDB IDs 6FTR and 6GTH. CXIDB IDs 80 and 83.
N. C. Woitowich, A. S. Halavaty, P. Waltz, C. Kupitz et al. "Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome". IUCrJ 5 (2018) p619. doi:10.1107/S2052252518010631 (open access - download PDF). PDB ID 6BAY.
M. L. Grünbein, J. Bielecki, A. Gorel, M. Stricker et al. "Megahertz data collection from protein microcrystals at an X-ray free-electron laser". Nature Communications 9 (2018) 3487. doi:10.1038/s41467-018-05953-4 (open access - download PDF). PDB IDs 6H0K, 6H0L, 6GW9 and 6GWA.
S. Botha, D. Baitan. K. E. J. Jungnickel, D. Oberthür et al. "De novo protein structure determination by heavy-atom soaking in lipidic cubic phase and SIRAS phasing using serial synchrotron crystallography". IUCrJ 5 (2018) p524. doi:10.1107/S2052252518009223 (open access - download PDF).
M. E. O'Sullivan, F. Poitevin, R. G. Sierra, C. Gati et al. "Aminoglycoside ribosome interactions reveal novel conformational states at ambient temperature". Nucleic Acids Research 46 (2018) p9793. doi:10.1093/nar/gky693 (open access - download PDF). PDB IDs 6CAS, 6CAR,
H. Shin, S. Kim and C. H. Yoon. "Data Analysis using Psocake at PAL-XFEL". J. Korean Physical Society 73 (2018) p16. doi:10.3938/jkps.73.16.
P. Nogly, T. Weinert, D. James, S. Carbajo et al. "Retinal isomerization in bacteriorhodopsin captures by a femtosecond x-ray laser". Science 361 (2018) eaat0094. doi:10.1126/science.aat0094. PDB IDs 6G7H, 6G7I, 6G7J, 6G7K and 6G7L.
J. L. Olmos Jr, S. Pandey, J. M. Martin-Garcia, G. Calvey et al. "Enzyme intermediates captured 'on the fly' by mix-and-inject serial crystallography". BMC Biology (2018) 16:59. doi:10.1186/s12915-018-0524-5 (open access - download PDF). PDB entries 6B5X, 6B5Y, 6B68, 6B69, 6B6A, 6B6B, 6B6C, 6B6D, 6B6E and 6B6F.
Z. Geng, M. Hu, Z. She, Q. Zhou et al. "An iterative refinement method combining detector geometry optimization and diffraction model refinement in serial femtosecond crystallography". Radiation Detection Technology and Methods (2018) 2:28. doi:10.1007/s41605-017-0034-y.
C. L. Lomelino, J. K. Kim, C. Lee, S. W. Lim et al. "Carbonic anhydrase II microcrystals suitable for XFEL studies". Acta Cryst. F74 (2018) p327. doi:10.1107/S2053230X18006118.
D. B. Lee, J.-M. Kim, J. H. Seok, J.-H. Lee et al. "Supersaturation-controlled microcrystallization and visualization analysis for serial femtosecond crytstallography". Scientific Reports 8:2541 (2018). doi:10.1038/s41598-018-20899-9 (open access - download PDF).
R. Suno, K. T. Kimura, T. Nakane, K. Yamashita et al. "Crystal Structures of Human Orexin 2 Receptor Bound to the Subtype-Selective Antagonist EMPA". Structure 26 (2018) p7. doi:10.1016/j.str.2017.11.005. PDB entry 5WS3 and CXIDB ID 74.

2017 (24 this year, 96 total to date)

T. Tosha, T. Nomura, T. Nishida, N. Saeki et al. "Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate". Nature Communications 8 (2017) 1583. doi:10.1038/s41467-017-01702-1 (open access - download PDF). PDB entries 5Y5I, 5Y5J, 5Y5K and 5Y5L. CXIDB ID 63 and 64.
T. P. Halsted, K. Yamashita, K. Hirata, H. Ago et al. "An unprecedented dioxygen species revealed by serial femtosecond rotation crystallography in copper nitrite reductase". IUCrJ 5 (2017) p22. doi:10.1107/S2052252517016128 (open access - download PDF). PDB entry 5ONX.
A. Gorel, K. Motomura, H. Fukuzawa, R. B. Doak et al. "Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability". Nature Communications 8:1170 (2017). doi:10.1038/s41467-017-00754-7 (open access - download PDF). PDB entry 5OER and CXIDB ID 66.
K. R. Beyerlein, D. Dierksmeyer, V. Mariani, M. Kuhn et al. "Mix-and-diffuse serial synchrotron crystallography". IUCrJ 4 (2017) p769. doi:10.1107/S2052252517013124 (open access - download PDF). PDB entries 5NJP, 5NJQ, 5NJR and 5NJS.
T. Weinert, N. Olieric, R. Cheng, S. Brünle et al. "Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons". Nature Communications 8:542 (2017). doi:10.1038/s41467-017-00630-4 (open access - download PDF). PDB entries 5NJM, 5NLX, 5NQT, 5O5W, 5NM2, 5NM4 and 5NM5.
C. D. M. Hutchison, V. Cordon-Preciado, R. M. L. Morgan, T. Nakane et al. "X-ray Free Electron Laser Determination of Crystal Structures of Dark and Light States of a Reversibly Photoswitching Fluorescent Protein at Room Temperature". Int. J. Mol. Sci. 18 (2017) p1918. doi:10.3390/ijms18091918 (open access - download PDF). PDB entries 5OOZ, 5OQE, 5OQ9 and 5OQA.
M. Kubo, E. Nango, K. Tono, T. Kimura et al. "Nanosecond pump-probe device for time-resolved serial femtosecond crystallography developed at SACLA". Journal of Synchrotron Radiation 24 (2017) p1086. doi:S160057751701030X (open access - download PDF). CXIDB ID 72.
K. Yamashita, N. Kuwabara, T. Nakane, T. Murai et al. "Experimental phase determination with seleno-methionine or mercury-derivatization in serial femtosecond crystallography". IUCrJ 4 (2017) p639. doi:10.1107/S2052252517008557 (open access - download PDF). PDB entries 5XFC, 5XFD and 5XFE. CXIDB ID 61 and 62.
K. R. Beyerlein, T. A. White, O. Yefanov, C. Gati et al. "FELIX: an algorithm for indexing multiple crystallites in X-ray free-electron laser snapshot diffraction images". Journal of Applied Crystallography 50 (2017) p1075. doi:10.1107/S1600576717007506 (open access - download PDF).
H. Naitow, Y. Matsuura, K. Tono, Y. Joti et al. "Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation". Acta Cryst. D73 (2017) p702. doi:10.1107/S2059798317008919 (open access - download PDF). PDB entries 5WR2, 5WR3 and 5WR4. CXIDB ID 73.
X. E. Zhou, Y. He, P. W. de Waal, X. Gao et al. "Identification of Phosphorylation Codes for Arrestin Recruitment by G Protein-Coupled Receptors". Cell 170 (2017) p457. doi:10.1016/j.cell.2017.07.002.
A. Ishchenko, D. Wacker, M. Kapoor, A. Zhang et al. "Structural insights into the extracellular recognition of the human serotonin 2B receptor by an antibody". PNAS (2017). doi:10.1073/pnas.1700891114.
I. Ishigami, N. A. Zatsepin, M. Hikita, C. E. Conrad et al. "Crystal structure of CO-bound cytochrome c oxidase determined by serial femtosecond X-ray crystallography at room temperature". PNAS (2017). doi:10.1073/pnas.1705628114. PDB entry 5W97.
R. Andersson, C. Safari, R. Dods, E. Nango et al. "Serial femtosecond crystallography structure of cytochrome c oxidase at room temperature. Scientific Reports 7 (2017) 4518. doi:10.1038/s41598-017-04817-z (open access - download PDF). PDB ID 5NDC.
A. Shimada, M. Kubo, S. Baba, K. Yamashita et al. "A nanosecond time-resolved XFEL analysis of structural changes associated with CO release from cytochrome c oxidase". Sciences Advances 3 (2017) e1603042. doi:10.1126/sciadv.1603042 (open access - download PDF).
J. M. Martin-Garcia, C. E. Conrad, G. Nelson, N. Stander et al. "Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation". IUCrJ 4 (2017) p439. doi:10.1107/S205225251700570X (open access - download PDF). PDB entries 5UVI, 5UVJ, 5UVK and 5UVL.
H. Zhang, A. Qiao, D. Yang, L. Yang et al. "Structure of the full-length glucagon class B G-protein-coupled receptor". Nature 546 (2017) p259. doi:10.1038/nature22363. PDB entry 5XEZ.
T. Masuda, M. Suzuki, S. Inoue, C. Song et al. "Atomic resolution structure of serine protease proteinase K at ambient temperature". Scientific Reports 7 (2017) 45604. doi:10.1038/srep45604 (open access - download PDF). PDB entry 5KXU and CXIDB ID 45.
H. Zhang, G. W. Han, A. Batyuk, A. Ishchenko et al. "Structural basis for selectivity and diversity in angiotensin II receptors". Nature 544 (2017) p327. doi:10.1038/nature22035. PDB entries 5UNF, 5UNG and 5UNH.
M. Sugahara, T. Nakane, T. Masuda, M. Suzuki et al. "Hydroxyethyl cellulose matrix applied to serial crystallography". Scientific Reports 7 (2017) 703. doi:10.1038/s41598-017-00761-0 (open access - download PDF). PDB entries 5WR8, 5WR9, 5WRA, 5WRB and 5WRC. CXIDB ID 47, 48, 49 and 50.
D. Oberthür, J. Knoska, M. O. Weidorn, K. R. Beyerlein et al. "Double-flow focused liquid injector for efficient serial femtosecond crystallography". Scientific Reports 7 (2017) 44628. doi:10.1038/srep44628 (open access - download PDF) and PDB entries 5U5Q, 5MND and 5TRX.
M. Suga, F. Akita, M. Sugahara, M. Kubo et al. "Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL". Nature 543 (2017) p131. doi:10.1038/nature21400 and PDB entries 5WS5, 5WS6, 5GTH and 5GTI.
C. Gati, D. Oberthür, O. Yefanov, R. D. Bunker et al. "Atomic structure of granulin determined from native nanocrystalline granulovirus using an X-ray free-electron laser". PNAS 114 (2017) p2247. doi:10.1073/pnas.1609243114 and PDB entry 5G0Z.
K. Hasegawa, K. Yamashita, T. Murai, N. Nuemket et al. "Development of a dose-limiting data collection strategy for serial synchrotron rotation crystallography". J. Synchrotron Radiation 24 (2017) p29. doi:10.1107/S1600577516016362 (open access - download PDF). CXIDB ID 46.

2016 (19 this year, 72 total to date)

E. Nango, A. Royant, M. Kubo, T. Nakane et al. "A three-dimensional movie of structural changes in bacteriorhodopsin". Science 354 (2016) p1552. doi:10.1126/science.aah3497 and PDB entries 5B6V, 5B6W, 5H2H, 5H2I, 5H2J, 5B6X, 5H2K, 5H2L, 5H2M, 5B6Y, 5H2N, 5H2O, 5H2P and 5B6Z. CXIDB ID 53.
C. Kupitz, J. L. Olmos Jr., M. Holl, L. Tremblay et al. "Structural enzymology using X-ray free electron lasers". Structural Dynamics 4 (2016) 044003. doi:10.1063/1.4972069 (open access - download PDF).
J. R. Stagno, Y. Liu, Y. R. Bhandari, C. E. Conrad et al. "Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography". Nature 541 (2016) p242. doi:10.1038/nature20599 and PDB entries 5E54, 5SWD and 5SWE.
M. S. Hunter, C. H. Yoon, H. DeMirci, R. G. Sierra et al. "Selenium single-wavelength anomalous diffraction de novo phasing using an X-ray-free electron laser". Nature Communications 7:13388. doi:10.1038/ncomms13388 (open access - download PDF) and PDB entry 5JD2. CXIDB ID 54 and 55.
T. Nakane, S. Hanashima, M. Suzuki, H. Saiki et al. "Membrane protein structure determination by SAD, SIR, or SIRAS phasing in serial femtosecond crystallography using an iododetergent". PNAS 113 (2017) p13039. doi:10.1073/pnas.1602531113. PDB entries 5B34 and 5B35, and CXIDB ID 34.
P. Edlund, H. Takala, E. Claesson, L. Henry et al. "The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography". Scientific Reports 6:35279. doi:10.1038/srep35279 (open access - download PDF), PDB entry 5L8M and CXIDB ID 52.
A. Batyuk, L. Galli, A. Ishchenko, G. W. Han et al. "Native phasing of x-ray free-electron laser data for a G protein-coupled receptor". Science Advances 2:e1600292. doi:10.1126/sciadv.1600292 (open access - download PDF) and PDB entries 5K2A, 5K2B, 5K2C and 5K2D.
P. Nogly, V. Panneels, G. Nelson, C. Gati et al. "Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography". Nature Communications 7:12314. doi:10.1038/ncomms12314 (open access - download PDF) and PDB entry 5J7A.
T. Zhang, Y. Gu and H. Fan. "Effect of impurities and post-experimental purification in SAD phasing with serial femtosecond crystallography data". Acta Cryst. D72 (2016) p789. doi:10.1107/S205979831600646X.
K. Pande, C. D. M. Hutchison, G. Groenhof, A. Aquila et al. "Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein". Science 352 (2016) p725. doi:10.1126/science.aad5081 and PDB entries 5HD3, 5HDC, 5HDD, 5HDS and 5HD5.
S. Tsujino and T. Tomizaki. "Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature". Scientific Reports 6:25558. doi:10.1038/srep25558 (open access - download PDF) and PDB entries 5FDJ and 5FEK.
T. Nakane, Y. Joti, K. Tono, M. Yabashi et al. "Data processing pipeline for serial femtosecond crystallography at SACLA". J. Appl. Cryst. 49 (2016) p1035. doi:10.1107/S1600576716005720 (open access - download PDF).
M. Sugahara, C. Song, M. Suzuki, T. Masuda et al. "Oil-free hyaluronic acid matrix for serial femtosecond crystallography". Scientific Reports 6:24484. doi:10.1038/srep24484 (open access - download PDF) and PDB entries 5B1D, 5B1E, 5B1F and 5B1G.
F. Mafuné, K. Miyajima, K. Tono, Y. Takeda et al. "Microcrystal delivery by pulsed liquid droplet for serial femtosecond crystallography". Acta Cryst. D72, p520. doi:10.1107/S2059798316001480, PDB entry 5DM9 and CXIDB ID 35.
K. Nass, A. Meinhart, T. R. M. Barends, L. Foucar et al. "Protein structure determination by single-wavelength anomalous diffraction phasing of X-ray free-electron laser data". IUCrJ 3 (2016) p180. doi:10.1107/S2052252516002980 (open access - download PDF) and PDB entry 5FGT.
Y. Fukuda, K. M. Tse, T. Nakane, T. Nakatsu et al. "Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography". PNAS 113 (2016) p2928. doi:10.1073/pnas.1517770113, PDB entries 4YSC and 5D4I, and CXIDB ID 34.
J.-P. Colletier, M. Sliwa, F.-X. Gallat, M. Sugahara et al. "Serial Femtosecond Crystallography and Ultrafast Absorption Spectroscopy of the Photoswitchable Fluorescent Protein IrisFP". J. Physical Chemistry Letters 7 (2016) p882. doi:10.1021/acs.jpclett.5b02789.
K. Ayyer, O. M. Yefanov, D. Oberthür, S. Roy-Chowdhury et al. "Macromolecular diffractive imaging using imperfect crystals". Nature 550 (2016) p202. doi:10.1038/nature16949 and PDB entries 5E7C and 5E79.
A. J. Jakobi, D. M. Passon, K. Knoops, F. Stellato et al. "In cellulo serial crystallography of alcohol oxidase crystals inside yeast cells". IUCrJ 3 (2016) p88. doi:10.1107/S2052252515022927 (open access - download PDF.

2015 (23 this year, 53 total to date)

D. Li, P. J. Stansfeld, M. S. P. Sansom, A. Keogh et al. "Ternary structure reveals mechanism of a membrane diacylglycerol kinase". Nature Communications 6 (2015) 10140. doi:10.1038/ncomms10140 (open access - download PDF) and PDB entry 4UYO.
R. G. Sierra, C. Gati, H. Laksmono, E. H. Dao et al. "Concentric-flow electrokinetic injector enables serial crystallography of ribosome and photosystem II". Nature Methods 13 (2015) p59. doi:10.1038/nmeth.3667 and PDB entry 5BR8.
T. Nakane, C. Song, M. Suzuki, E. Nango et al. "Native sulfur/chlorine SAD phasing for serial femtosecond crystallography". Acta. Cryst. D71 (2015) p2159. doi:10.1107/S139900471501857X (open access - download PDF) and PDB entry 4YOP and CXIDB ID 33.
T. Zhang, D. Yao, J. Wang, Y. Gu and H. Fan. "Serial crystallographic analysis of protein isomorphous replacement data from a mixture of native and derivative microcrystals". Acta Cryst. D71 (2015) p2513. doi:10.1107/S139900471501603X.
L. Galli, S.-K. Son, T. R. M. Barends, T. A. White et al. "Towards phasing using high X-ray intensity". IUCrJ 2 (2015) p627. doi:10.1107/S2052252515014049 (open access - download PDF).
K. Yamashita, D. Pan, T. Okuda, M. Sugahara et al. "An isomorphous replacement method for efficient de novo phasing for serial femtosecond crystallography". Scientific Reports 5:14017 (2015). doi:10.1038/srep14017 (open access - download PDF), CXIDB ID 31 and PDB entries 5D9B and 5D9C.
T. R. M. Barends, L. Foucar, A. Ardevol, K. Nass et al. "Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation". Science 350 (2015) p445. doi:10.1126/science.aac5492 and PDB entries 5CMV, 5CN4, 5CN5, 5CN6, 5CN7, 5CN8, 5CN9, 5CNB, 5CNC, 5CND, 5CNE, 5CNF and 5CNG.
R. Fromme, A. Ishchenko, M. Metz, S. R. Chowdhury et al. "Serial femtosecond crystallography of soluble proteins in lipidic cubic phase". IUCrJ 2 (2015) p545. doi:10.1107/S2052252515013160 (open access - download PDF) and PDB entries 4ZIX and 4ZIZ.
Y. Kang, X. E. Zhou, X. Gao, Y. He et al. "Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser". Nature 523 (2015) p561. doi:10.1038/nature14656 and PDB entry 4ZWJ.
C. E. Conrad, S. Basu, D. James, D. Wang et al. "A novel inert crystal delivery medium for serial femtosecond crystallography". IUCrJ 2 (2015) p421. doi:10.1107/S2052252515009811 (open access - download PDF) and PDB entry 4Z8K.
M. Bublitz, K. Nass, N. D. Drachmann, A. J. Markvardsen et al. "Structural studies of P-type ATPase-ligand complexes using an X-ray free-electron laser". IUCrJ 2 (2015) p409. doi:10.1107/S2052252515008969 (open access - download PDF) and PDB entry 4XOU.
M. Schmidt, K. Pande, S. Basu and J. Tenboer. "Room temperature structures beyond 1.5 Å by serial femtosecond crystallography". Structural Dynamics 2 (2015) 041708. doi:10.1063/1.4919903 (open access - download PDF).
L. Galli, S.-K. Son, M. Klinge, S. Bajt et al. "Electronic damage in S atoms in a native protein crystal induced by an intense X-ray free-electron laser pulse". Structural Dynamics 2 (2015) 041703. doi:10.1063/1.4919398 (open access - download PDF).
N. Coquelle, A. S. Brewser, U. Kapp, A. Shilova et al. "Raster-scanning serial protein crystallography using micro- and nano-focused synchrotron beams". Acta Cryst. D71 (2015) p1184. doi:10.1107/S1399004715004514 (open access - download PDF) and PDB entries 4WG1, 4WG7, 4WL6 and 4WL7.
T. Zhang, S. Jin, Y. Gu, Y. He et al. "SFX analysis of non-biological polycrystalline samples". IUCrJ 2 (2015) p322. doi:10.1107/S2052252515002146 (open access - download PDF).
H. Zhang, H. Unal, C. Gati, G. W. Han et al. "Structure of the angiotensin receptor revealed by serial femtosecond crystallography". Cell (2015) p833. doi:10.1016/j.cell.2015.04.011 and PDB entry 4YAY. CXIDB ID 38.
T. Barends, T. A. White, A. Barty, L. Foucar et al. "Effects of self-seeding and crystal post-selection on the quality of Monte Carlo-integrated SFX data". Journal of Synchrotron Radiation 22 (2015) p644. doi:10.1107/S1600577515005184.
S. Boutet, L. Foucar, T. R. M. Barends, S. Botha et al. "Characterization and use of the spent beam for serial operation of LCLS". Journal of Synchrotron Radiation 22 (2015) p634. doi10.1107/S1600577515004002 (open access - download PDF) and PDB entries 4RW1 and 4RW2.
Y. Feng, R. Alonso-Mori, T. R. M. Barends, V. D. Blank et al. "Demonstration of simultaneous experiments using thin crystal multiplexing at the Linac Coherent Light Source". Journal of Synchrotron Radiation 22 (2015) p626. doi:10.1107/S1600577515003999 (open access - download PDF).
K. Tono, E. Nango, M. Sugahara, C. Song et al. "Diverse application platform for hard X-ray diffraction in SACLA (DAPHNIS): application to serial protein crystallography using an X-ray free-electron laser". Journal of Synchrotron Radiation 22 (2015) p532. doi:10.1107/S1600577515004464 and PDB entry 3WUN.
Y. Joti, T. Kameshima, M. Yamaga, T. Sugimoto and K. Okada. "Data acquisition system for X-ray free-electron laser experiments at SACLA". Journal of Synchrotron Radiation 22 (2015) p571. doi:/10.1107/S1600577515004506.
G. Fenalti, N. A. Zatsepin, C. Betti, P. Giguere et al. "Structural basis for bifunctional peptide recognition at human δ-opioid receptor". Nature Structural & Molecular Biology (2015) p265. doi:10.1038/nsmb.2965 and PDB entry 4RWD. CXIDB ID 40.
P. Nogly, D. James, D. Wang, T. A. White et al. "Lipidic cubic phase serial millisecond crystallography using synchrotron radiation". IUCrJ 2 (2015) p168. doi:10.1107/S2052252514026487 (open access - download PDF) and PDB entry 4X31.

2014 (17 this year, 30 total to date)

J. Tenboer, S. Basu, N. Zatsepin, K. Pande et al. "Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein". Science 346 (2014) p1242. doi:10.1126/science.1259357 and PDB entries 4WL9 and 4WLA.
M. Sugahara, E. Mizohata, E. Nango, M. Suzuki et al. "Grease matrix as a versatile carrier of proteins for serial crystallography". Nature Methods (2014) p61. doi:10.1038/nmeth.3172 and PDB entries 3WUL, 3WXT, 3WXU, 3WUM, 4W4Q, 3WXS and 3WXQ.
M. R. Sawaya, D. Cascio, M. Gingery, J. Rodriguez et al. "Protein crystal structure obtained at 2.9 Å resolution from injecting bacterial cells into an X-ray free-electron laser beam". PNAS 111 (2014) p12769. doi:10.1073/pnas.1413456111 and PDB entries 4QX1 and 4QX3.
H. Liu and J. C. H. Spence. "The indexing ambiguity in serial femtosecond crystallography (SFX) resolved using an expectation maximization algorithm". IUCrJ 1 (2014) p393. doi:10.1107/S2052252514020314 (open access - download PDF).
M. S. Hunter, B. Segelke, M. Messerschmidt, G. J. Williams et al. "Fixed-target protein serial microcrystallography with an x-ray free electron laser". Scientific Reports 4 (2014) 6026. doi:10.1038/srep06026 (open access - download PDF).
T. Zhang, Y. Li and L. Wu. "An alternative method for data analysis in serial femtosecond crystallography". Acta Cryst. A70 (2014) p670. doi:10.1107/S2053273314016982.
C. Kupitz, S. Basu, I. Grotjohann, R. Fromme et al. "Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser". Nature 513 (2014) p261. doi:10.1038/nature13453 and PDB entries 4PBU and 4Q54.
M. Caffrey, D. Li, N. Howe and S. T. A. Shah. "'Hit and run' serial femtosecond crystallography of a membrane kinase in the lipid cubic phase". Phil Trans. Roy. Soc. B 369 (2014) 20130621. doi:10.1098/rstb.2013.0621 (open access - download PDF).
O. Yefanov, C. Gati, G. Bourenkov, R. A. Kirian et al. "Mapping the continuous reciprocal space intensity distribution of X-ray serial crystallography". Phil. Trans. Roy. Soc. B 369 (2014) 20130333 doi:10.1098/rstb.2013.0333 (open access - download PDF).
T. A. White. "Post-refinement method for snapshot serial crystallography". Phil. Trans. Roy. Soc. B 369 (2014) 20130330. doi:10.1098/rstb.2013.0330 (open access - download PDF).
J. C. H. Spence, N. A. Zatsepin and C. Li. "Coherent convergent-beam time-resolved X-ray diffraction". Phil. Trans. Roy. Soc. B 369 (2014) 20130325 doi:10.1098/rstb.2013.0325.
F. Stellato, D. Oberthür, M. Liang, R. Bean et al. "Room-temperature macromolecular serial crystallography using synchrotron radiation". IUCrJ 1 (2014) p204. doi:10.1107/S2052252514010070 (open access - download PDF) and PDB entry 4O34.
K. Qu, L. Zhou and Y.-H. Dong. "An improved integration method in serial femtosecond crystallography". Acta Cryst. D70 (2014) p1202. doi:10.1107/S1399004714002004.
M. Frank, D. B. Carlson, M. S. Hunter, G. J. Williams et al. "Femtosecond X-ray diffraction from two-dimensional protein crystals". IUCrJ 1 (2014) p95. doi:10.1107/S2052252514001444 (open access - download PDF).
C. Gati, G. Bourenkov, M. Klinge, D. Rehders et al. "Serial crystallography on in vivo grown microcrystals using synchrotron radiation". IUCrJ 1 (2014) p87. doi:10.1107/S2052252513033939 (open access - download PDF) and PDB entry 4N4Z.
U. Weierstall, D. James, C. Wang, T. A. White et al. "Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography". Nature Communications 5:3309 (2014). doi:10.1038/ncomms4309 and PDB entry 4O9R. CXIDB ID 39.
C. Song, K. Tono, J. Park, T. Ebisu et al. "Multiple application X-ray imaging chamber for single-shot diffraction experiments with femtosecond X-ray laser pulses". J. Appl. Cryst. 47 (2014) p18. doi:10.1107/S1600576713029944.

2013 (7 this year, 13 total to date)

W. Liu, D. Wacker, C. Gati, G. W. Han et al. "Serial Femtosecond Crystallography of G Protein-Coupled Receptors". Science 342 (2013) p1522. doi:10.1126/science.1244142, PDB entry 4NC3 and CXIDB ID 21.
L. C. Johansson, D. Arnlund, G. Katona, T. A. White et al. "Structure of a photosynthetic reaction centre determined by serial femtosecond crystallography". Nature Communications 4:2911 (2013). doi:10.1038/ncomms3911 (open access - download PDF) and PDB entry 4CAS.
T. R. M. Barends, L. Foucar, S. Botha, R. B. Doak et al. "De novo protein crystal structure determination from X-ray free-electron laser data". Nature 505 (2013) p244. doi:10.1038/nature12773, PDB entry 4N5R and CXIDB ID 20.
H. Dermirci, R. G. Sierra, H. Laksmono, R. L. Shoeman et al. "Serial femtosecond X-ray diffraction of 30S ribosomal subunit microcrystals in liquid suspension at ambient temperature using an X-ray free-electron laser". Acta Cryst. F69 (2013) p1066. doi:10.1107/S174430911302099X (open access - download PDF).
T. A. White, A. Barty, F. Stellato, J. M. Holton, R. A. Kirian, N. A. Zatsepin and H. N. Chapman. "Crystallographic data processing for free-electron laser sources". Acta Cryst. D69 (2013), p1231. doi:10.1107/S0907444913013620.
T. R. M. Barends, L. Foucar, R. L. Shoeman, S. Bari et al. "Anomalous signal from S atoms in protein crystallographic data from an X-ray free-electron laser". Acta Cryst. D69 (2013) p838. doi:10.1107/S0907444913002448 (open access - download PDF).
L. Redecke, K. Nass et al. "Natively Inhibited Trypanosoma brucei Cathepsin B Structure Determined by Using an X-ray Laser". Science 339 (2013) p227. doi:10.1126/science.1229663 and PDB entry 4HWY.

2012 (5 this year, 6 total to date)

S. Boutet, L. Lomb, G. J. Williams, T. R. M. Barends et al. "High-Resolution Protein Structure Determination by Serial Femtosecond Crystallography". Science 337 (2012) p362. doi:10.1126/science.1217737, PDB entries 4ET8 and 4ET9, and CXIDB ID 17.
L. C. Johansson, D. Arnlund, T. A. White, G. Katona et al. "Lipidic phase membrane protein serial femtosecond crystallography". Nature Methods 9 (2012) p263. doi:10.1038/nmeth.1867 and PDB entry 4AC5.
R. Koopmann, K. Cupelli, L. Redecke, K. Nass et al. "In vivo protein crystallization opens new routes in structural biology". Nature Methods 9 (2012) p259. doi:10.1038/nmeth.1859.
A. Aquila, M. S. Hunter, R. B. Doak et al. "Time-resolved protein nanocrystallography using an X-ray free-electron laser". Optics Express 20 (2012) p2706. doi:10.1364/OE.20.002706 (open access - download PDF).
A. Barty, C. Caleman, A. Aquila, N. Timneanu et al. "Self-terminating diffraction gates femtosecond X-ray nanocrystallography measurements". Nature Photonics 6 (2012) p35. doi:10.1038/nphoton.2011.297.

2011 (1 this year)

H. N. Chapman, P. Fromme et al. "Femtosecond X-ray protein nanocrystallography". Nature 470 (2011) p73. doi:10.1038/nature09750 and PDB entry 3PCQ.

Useful references

Here are some papers describing CrystFEL or its algorithms:

T. A. White, V. Mariani, W. Brehm, O. Yefanov, A. Barty, K. R. Beyerlein, F. Chervinskii, L. Galli, C. Gati, T. Nakane, A. Tolstikova, K. Yamashita, C. H. Yoon, K. Diederichs and H. N. Chapman. "Recent developments in CrystFEL". J. Applied Crystallography 49 (2016) p680-689.
doi:10.1107/S1600576716004751 — Download PDF
O. Yefanov, V. Mariani, C. Gati, T. A. White, H. N. Chapman and A. Barty. "Accurate determination of segmented X-ray detector geometry". Optics Express 23 (2015) p28459-28470.
doi:10.1364/OE.23.028459 — Download PDF
T. A. White. "Post-refinement method for snapshot serial crystallography". Phil. Trans. Roy. Soc. B 369 (2014) 20130330.
doi:10.1098/rstb.2013.0330 — Download PDF
T. A. White, A. Barty, F. Stellato, J. M. Holton, R. A. Kirian, N. A. Zatsepin and H. N. Chapman. "Crystallographic data processing for free-electron laser sources". Acta Cryst. D69 (2013), p1231–1240.
doi:10.1107/S0907444913013620 — Download PDF
T. A. White, R. A. Kirian, A. V. Martin, A. Aquila, K. Nass, A. Barty and H. N. Chapman. "CrystFEL: a software suite for snapshot serial crystallography". J. Appl. Cryst. 45 (2012), p335–341.
doi:10.1107/S0021889812002312 — Download PDF — Article on IUCr website
R. A. Kirian, X. Wang, U. Weierstall, K. E. Schmidt, J. C. H. Spence, M. Hunter, P. Fromme, T. White, H. N. Chapman and J. Holton. "Femtosecond protein nanocrystallography - data analysis methods". Optics Express 18 (2010) p5713. doi:10.1364/OE.18.005713 — Download PDF